BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A05LP1|AL426132
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1604 0.0
>3x_Contig1682
Length = 16889
Score = 1604 bits (809), Expect = 0.0
Identities = 809/809 (100%)
Strand = Plus / Minus
Query: 1 gatcaaatcaaaagatcgttgcaaaatatcggtgccaaacctttacaagatcatgtcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12360 gatcaaatcaaaagatcgttgcaaaatatcggtgccaaacctttacaagatcatgtcact 12301
Query: 61 ttagagactacacatttcattgcaacagagttcgaagatagcgaaggcgttacttccgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12300 ttagagactacacatttcattgcaacagagttcgaagatagcgaaggcgttacttccgat 12241
Query: 121 gaggaattggctcatgctagagataacaatataccaattgtcagacctgaatggattagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12240 gaggaattggctcatgctagagataacaatataccaattgtcagacctgaatggattagg 12181
Query: 181 gcctgtgaactggaaaaacgaatcgtgggtgtcagagatttctacctggattcagatcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12180 gcctgtgaactggaaaaacgaatcgtgggtgtcagagatttctacctggattcagatcca 12121
Query: 241 tccaatttcttaaattacaagttcacagcagctgcaccttcgtcaggtgatgccttgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12120 tccaatttcttaaattacaagttcacagcagctgcaccttcgtcaggtgatgccttgaag 12061
Query: 301 gaaactgcaccagagagggagccagaacaggcgacatctccagatgggacagaaacgact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12060 gaaactgcaccagagagggagccagaacaggcgacatctccagatgggacagaaacgact 12001
Query: 361 gcaaaagaagtagaagtagttgaaccaattgttccagaagaaacacaaccagctccagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12000 gcaaaagaagtagaagtagttgaaccaattgttccagaagaaacacaaccagctccagaa 11941
Query: 421 gaaaatgcaccggtcgttcaagaagaaacagaactgatcgtccaagaagaaacagaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11940 gaaaatgcaccggtcgttcaagaagaaacagaactgatcgtccaagaagaaacagaacca 11881
Query: 481 gctgtccaagaagaaccagagtcagttgtcccagaagaaacagaaccagctgtctcagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11880 gctgtccaagaagaaccagagtcagttgtcccagaagaaacagaaccagctgtctcagag 11821
Query: 541 gtaacacctccacaagaagcacaagaagcatccaaaaaggtagaagaagagccagagaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11820 gtaacacctccacaagaagcacaagaagcatccaaaaaggtagaagaagagccagagaca 11761
Query: 601 ctatcttcacatgaagaaccagaagcggcaacaccgccaactgatcagccacaagtgctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11760 ctatcttcacatgaagaaccagaagcggcaacaccgccaactgatcagccacaagtgctg 11701
Query: 661 aaacaagaagaagaagaagaagctccagcatccgaagctcctaccgtcggagaagagatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11700 aaacaagaagaagaagaagaagctccagcatccgaagctcctaccgtcggagaagagatc 11641
Query: 721 aatgtcgaagcatccgtagaagaagttcctgtagaagtcccggcagaagagcaaccaaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11640 aatgtcgaagcatccgtagaagaagttcctgtagaagtcccggcagaagagcaaccaaca 11581
Query: 781 gaaataatagacaatacagcaaacgagac 809
|||||||||||||||||||||||||||||
Sbjct: 11580 gaaataatagacaatacagcaaacgagac 11552
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8287
Number of Sequences: 1807
Number of extensions: 8287
Number of successful extensions: 337
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)